Redundant functions in phone and sniffer moved

File simtrace_iso7816.c is like a library for iso specific functions.
The next step will be to use the atmel softlib functions instead.
diff --git a/sam3s_example/simtrace/phone.c b/sam3s_example/simtrace/phone.c
index 2f79a77..0d077fb 100644
--- a/sam3s_example/simtrace/phone.c
+++ b/sam3s_example/simtrace/phone.c
@@ -90,54 +90,19 @@
  *-----------------------------------------------------------------------------*/
 /** Variable for state of send and receive froom USART */
 static uint8_t StateUsartGlobal = USART_RCV;
-/** Pin reset master card */
-static Pin st_pinIso7816RstMC;
 
-static uint32_t char_stat = 0;
-static char rcvdChar = 0;
+extern uint32_t char_stat;
+extern uint8_t rcvdChar;
 
 /*-----------------------------------------------------------------------------
  *          Interrupt routines
  *-----------------------------------------------------------------------------*/
-/* 
- *  char_stat is zero if no error occured. 
- *  Otherwise it is filled with the content of the status register.
- */
-void USART1_IrqHandler( void )
-{
-    uint32_t stat;
-    char_stat = 0;
-    // Rcv buf full
-/*    if((stat & US_CSR_RXBUFF) == US_CSR_RXBUFF) {
-        TRACE_DEBUG("Rcv buf full");
-        USART_DisableIt(USART1, US_IDR_RXBUFF);
-    }
-*/
-    uint32_t csr = USART_PHONE->US_CSR;
-
-//    printf(".\n\r");
-
-    if (csr & US_CSR_TXRDY) {
-        /* transmit buffer empty, nothing to transmit */
-    } 
-    if (csr & US_CSR_RXRDY) {
-        stat = (csr&(US_CSR_OVRE|US_CSR_FRAME|
-                        US_CSR_PARE|US_CSR_TIMEOUT|US_CSR_NACK|
-                        (1<<10)));
-
-        if (stat == 0 ) {
-            /* Get a char */
-            rcvdChar = ((USART_PHONE->US_RHR) & 0xFF);
-        } /* else: error occured */
-        char_stat = stat;
-    }
-}
 
 static void ISR_PhoneRST( const Pin *pPin)
 {
     TRACE_DEBUG("+++++++++ Interrupt!! ISR:0x%x, CSR:0x%x\n\r", pinPhoneRST.pio->PIO_ISR, USART1->US_CSR);
-    phone_state = SEND_ATR;
-    PIO_DisableIt( &pinPhoneRST ) ;
+    // FIXME: What to do on reset?
+    // PIO_DisableIt( &pinPhoneRST ) ;
 }
 
 static void Config_PhoneRST_IrqHandler()
@@ -227,7 +192,7 @@
                                       (1<<10)));
 
     if (status != 0 ) {
-        TRACE_DEBUG("******* status: 0x%X (Overrun: %d, NACK: %d, Timeout: %d, underrun: %d)\n\r",
+        TRACE_DEBUG("******* status: 0x%X (Overrun: %lu, NACK: %lu, Timeout: %lu, underrun: %lu)\n\r",
                     status, ((status & US_CSR_OVRE)>> 5), ((status & US_CSR_NACK) >> 13),
                     ((status & US_CSR_TIMEOUT) >> 8), ((status & (1 << 10)) >> 10));
 
@@ -240,64 +205,15 @@
     return( status );
 }
 
-
-/** Initializes a ISO driver
- *  \param pPinIso7816RstMC Pin ISO 7816 Rst MC
- */
-// FIXME: This function is implemented in iso7816_4.c !! Only MCK instead of SCK is always taken. Change that!
-void _ISO7816_Init( const Pin pPinIso7816RstMC )
-{
-    TRACE_DEBUG("ISO_Init\n\r");
-
-    /* Pin ISO7816 initialize */
-    st_pinIso7816RstMC  = pPinIso7816RstMC;
-
-    USART_Configure( USART_PHONE,
-                     US_MR_USART_MODE_IS07816_T_0
-// Nope, we aren't master:   
- //                    | US_MR_USCLKS_MCK
-                     | US_MR_USCLKS_SCK
-                     | US_MR_NBSTOP_1_BIT
-                     | US_MR_PAR_EVEN
-                     | US_MR_CHRL_8_BIT
-                     | US_MR_CLKO   /** TODO: This field was set in the original simtrace firmware..why? */
-                     | (3<<24), /* MAX_ITERATION */
-                     1,
-                     0);
-    /* 
-    SYNC = 0 (async mode)
-    OVER = 0 (oversampling by 8?)
-    FIDI = 372 (default val on startup before other value is negotiated)
-    USCLKS = 3 (Select SCK as input clock) --> US_MR_USCLKS_SCK
-    CD = 1 ?    --> US_BRGR_CD(1)
-    */
-    USART_PHONE->US_FIDI = 372; 
-//    USART_PHONE->US_IDR = (uint32_t) -1;
-    USART_PHONE->US_BRGR = US_BRGR_CD(1);
-//    USART_PHONE->US_BRGR = BOARD_MCK / (372*9600);
-    USART_PHONE->US_TTGR = 5;
-
-    /* Configure USART */
-    PMC_EnablePeripheral(ID_USART_PHONE);
-
-    USART1->US_IDR = 0xffffffff;
-    USART_EnableIt( USART1, US_IER_RXRDY) ;
-    /* enable USART1 interrupt */
-    NVIC_EnableIRQ( USART1_IRQn ) ;
-    
-//    USART_PHONE->US_IER = US_IER_RXRDY | US_IER_OVRE | US_IER_FRAME | US_IER_PARE | US_IER_NACK | US_IER_ITER;
-
-    USART_SetTransmitterEnabled(USART_PHONE, 1);
-    USART_SetReceiverEnabled(USART_PHONE, 1);
-
-}
-
 void Phone_Master_Init( void ) {
     
     PIO_Configure( pinsISO7816_PHONE, PIO_LISTSIZE( pinsISO7816_PHONE ) ) ;
     Config_PhoneRST_IrqHandler();
-    _ISO7816_Init(pinIso7816RstMC);
 
+    _ISO7816_Init();
+
+    USART_SetTransmitterEnabled(USART_PHONE, 1);
+    USART_SetReceiverEnabled(USART_PHONE, 1);
 // FIXME: Or do I need to call VBUS_CONFIGURE() here instead, which will call USBD_Connect() later?
 //    USBD_Connect();
 // FIXME: USB clock? USB PMC?
diff --git a/sam3s_example/simtrace/simtrace.h b/sam3s_example/simtrace/simtrace.h
index 444e783..0e024e9 100644
--- a/sam3s_example/simtrace/simtrace.h
+++ b/sam3s_example/simtrace/simtrace.h
@@ -1,3 +1,5 @@
+#ifndef SIMTRACE_H
+#define SIMTRACE_H
 
 // FIXME: static function definitions
 extern uint32_t _ISO7816_GetChar( uint8_t *pCharToReceive );
@@ -6,4 +8,8 @@
 
 extern void Sniffer_Init( void );
 
+extern void SIMtrace_USB_Initialize( void );
 
+extern void _ISO7816_Init( void );
+
+#endif
diff --git a/sam3s_example/simtrace/simtrace_iso7816.c b/sam3s_example/simtrace/simtrace_iso7816.c
new file mode 100644
index 0000000..b03c6cd
--- /dev/null
+++ b/sam3s_example/simtrace/simtrace_iso7816.c
@@ -0,0 +1,117 @@
+/* ----------------------------------------------------------------------------
+ *         ATMEL Microcontroller Software Support
+ * ----------------------------------------------------------------------------
+ * Copyright (c) 2009, Atmel Corporation
+ *
+ * All rights reserved.
+ *
+ * Redistribution and use in source and binary forms, with or without
+ * modification, are permitted provided that the following conditions are met:
+ *
+ * - Redistributions of source code must retain the above copyright notice,
+ * this list of conditions and the disclaimer below.
+ *
+ * Atmel's name may not be used to endorse or promote products derived from
+ * this software without specific prior written permission.
+ *
+ * DISCLAIMER: THIS SOFTWARE IS PROVIDED BY ATMEL "AS IS" AND ANY EXPRESS OR
+ * IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
+ * MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NON-INFRINGEMENT ARE
+ * DISCLAIMED. IN NO EVENT SHALL ATMEL BE LIABLE FOR ANY DIRECT, INDIRECT,
+ * INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
+ * LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA,
+ * OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
+ * LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
+ * NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE,
+ * EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+ * ----------------------------------------------------------------------------
+ */
+
+/*------------------------------------------------------------------------------
+ *          Headers
+ *------------------------------------------------------------------------------*/
+
+#include "board.h"
+
+#include <string.h>
+
+extern uint8_t rcvdChar;
+extern uint32_t char_stat;
+
+/** Initializes a ISO driver
+ */ 
+// FIXME: This function is implemented in iso7816_4.c !! Only MCK instead of SCK is always taken. Change that!                                                                               
+void _ISO7816_Init( void )
+{   
+    TRACE_DEBUG("ISO_Init\n\r");
+                        
+    USART_Configure( USART_PHONE,                                                          
+                     US_MR_USART_MODE_IS07816_T_0
+// Nope, we aren't master:   
+ //                    | US_MR_USCLKS_MCK                                                  
+                     | US_MR_USCLKS_SCK                                                    
+                     | US_MR_NBSTOP_1_BIT                                                  
+                     | US_MR_PAR_EVEN                                                      
+                     | US_MR_CHRL_8_BIT                                                    
+                     | US_MR_CLKO   /** TODO: This field was set in the original simtrace firmware..why? */      
+                     | (3<<24), /* MAX_ITERATION */                                        
+                     1,
+                     0);
+    /*                                                                                     
+    SYNC = 0 (async mode)
+    OVER = 0 (oversampling by 8?)                                                          
+    FIDI = 372 (default val on startup before other value is negotiated)                   
+    USCLKS = 3 (Select SCK as input clock) --> US_MR_USCLKS_SCK                            
+    CD = 1 ?    --> US_BRGR_CD(1)
+    */                                                                                     
+    USART_PHONE->US_FIDI = 372; 
+//    USART_PHONE->US_IDR = (uint32_t) -1;
+    USART_PHONE->US_BRGR = US_BRGR_CD(1);
+//    USART_PHONE->US_BRGR = BOARD_MCK / (372*9600);
+    USART_PHONE->US_TTGR = 5;
+
+    /* Configure USART */
+    PMC_EnablePeripheral(ID_USART_PHONE);
+
+    USART1->US_IDR = 0xffffffff;
+    USART_EnableIt( USART1, US_IER_RXRDY) ;
+    /* enable USART1 interrupt */
+    NVIC_EnableIRQ( USART1_IRQn ) ;
+    
+//    USART_PHONE->US_IER = US_IER_RXRDY | US_IER_OVRE | US_IER_FRAME | US_IER_PARE | US_IER_NACK | US_IER_ITER;
+}
+
+/* 
+ *  Initializes rcvdChar with the char received on USART interface                            
+ *  char_stat is zero if no error occured. 
+ *  Otherwise it is filled with the content of the status register.                           
+ */
+void USART1_IrqHandler( void )                                                                
+{   
+    uint32_t stat;                                                                            
+    char_stat = 0;
+    // Rcv buf full
+/*    if((stat & US_CSR_RXBUFF) == US_CSR_RXBUFF) {                                           
+        TRACE_DEBUG("Rcv buf full");
+        USART_DisableIt(USART1, US_IDR_RXBUFF);                                               
+    }                                                                                         
+*/  
+    uint32_t csr = USART_PHONE->US_CSR;                                                       
+    
+    if (csr & US_CSR_TXRDY) {
+        /* transmit buffer empty, nothing to transmit */                                      
+    }  
+    if (csr & US_CSR_RXRDY) {
+        stat = (csr&(US_CSR_OVRE|US_CSR_FRAME|
+                        US_CSR_PARE|US_CSR_TIMEOUT|US_CSR_NACK|                               
+                        (1<<10)));                                                            
+        
+        if (stat == 0 ) {
+            /* Get a char */
+            rcvdChar = ((USART_PHONE->US_RHR) & 0xFF);                                        
+        } /* else: error occured */                                                           
+        char_stat = stat;                                                                     
+    }                                                                                         
+}                                                                                             
+
+
diff --git a/sam3s_example/simtrace/sniffer.c b/sam3s_example/simtrace/sniffer.c
index c68ee83..fd72446 100644
--- a/sam3s_example/simtrace/sniffer.c
+++ b/sam3s_example/simtrace/sniffer.c
@@ -58,89 +58,12 @@
     {VCC_FWD, PIOA, ID_PIOA, PIO_OUTPUT_1, PIO_DEFAULT}
 };
 
-uint32_t char_stat = 0;
-uint8_t rcvdChar = 0;
+extern uint32_t char_stat;
+extern uint8_t rcvdChar;
 
 /*-----------------------------------------------------------------------------
  *          Interrupt routines
  *-----------------------------------------------------------------------------*/
-/* 
- *  Initializes rcvdChar with the char received on USART interface
- *  char_stat is zero if no error occured. 
- *  Otherwise it is filled with the content of the status register.
- */
-void USART1_IrqHandler( void )
-{
-    uint32_t stat;
-    char_stat = 0;
-    // Rcv buf full
-/*    if((stat & US_CSR_RXBUFF) == US_CSR_RXBUFF) {
-        TRACE_DEBUG("Rcv buf full");
-        USART_DisableIt(USART1, US_IDR_RXBUFF);
-    }
-*/
-    uint32_t csr = USART_PHONE->US_CSR;
-
-    if (csr & US_CSR_TXRDY) {
-        /* transmit buffer empty, nothing to transmit */
-    } 
-    if (csr & US_CSR_RXRDY) {
-        stat = (csr&(US_CSR_OVRE|US_CSR_FRAME|
-                        US_CSR_PARE|US_CSR_TIMEOUT|US_CSR_NACK|
-                        (1<<10)));
-
-        if (stat == 0 ) {
-            /* Get a char */
-            rcvdChar = ((USART_PHONE->US_RHR) & 0xFF);
-        } /* else: error occured */
-        char_stat = stat;
-    }
-}
-
-/** Initializes a ISO driver
- *  \param pPinIso7816RstMC Pin ISO 7816 Rst MC
- */
-void _ISO7816_Init( )
-{
-    TRACE_DEBUG("ISO_Init\n\r");
-
-    USART_Configure( USART_PHONE,
-                     US_MR_USART_MODE_IS07816_T_0
-// Nope, we aren't master:   
- //                    | US_MR_USCLKS_MCK
-                     | US_MR_USCLKS_SCK
-                     | US_MR_NBSTOP_1_BIT
-                     | US_MR_PAR_EVEN
-                     | US_MR_CHRL_8_BIT
-                     | US_MR_CLKO   /** TODO: This field was set in the original simtrace firmware..why? */
-                     | (3<<24), /* MAX_ITERATION */
-                     1,
-                     0);
-    /* 
-    SYNC = 0 (async mode)
-    OVER = 0 (oversampling by 8?)
-    FIDI = 372 (default val on startup before other value is negotiated)
-    USCLKS = 3 (Select SCK as input clock) --> US_MR_USCLKS_SCK
-    CD = 1 ?    --> US_BRGR_CD(1)
-    */
-    USART_PHONE->US_FIDI = 372; 
-    USART_PHONE->US_BRGR = US_BRGR_CD(1);
-//    USART_PHONE->US_BRGR = BOARD_MCK / (372*9600);
-    USART_PHONE->US_TTGR = 5;
-
-    /* Configure USART */
-    PMC_EnablePeripheral(ID_USART_PHONE);
-
-    USART1->US_IDR = 0xffffffff;
-    USART_EnableIt( USART1, US_IER_RXRDY) ;
-    /* enable USART1 interrupt */
-    NVIC_EnableIRQ( USART1_IRQn ) ;
-    
-//    USART_PHONE->US_IER = US_IER_RXRDY | US_IER_OVRE | US_IER_FRAME | US_IER_PARE | US_IER_NACK | US_IER_ITER;
-
-    USART_SetReceiverEnabled(USART_PHONE, 1);
-
-}
 
 void Sniffer_Init( void ) 
 {
@@ -150,6 +73,7 @@
     
     PIO_Configure(pPwr, PIO_LISTSIZE( pPwr ));
 
-    _ISO7816_Init( );
+    _ISO7816_Init();
 
+    USART_SetReceiverEnabled(USART_PHONE, 1);
 }